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"In the event of Jedi officers acting against the interests of the Republic, and after receiving specific orders verified as coming directly from the Supreme Commander (Chancellor), GAR commanders will remove those officers by lethal force, and command of the GAR will revert to the Supreme Commander (Chancellor) until a new command structure is established."
―Order 66

Order 66 was one of the 150 Contingency Orders first established in the beginning days of the clone army, established by the Kaminoans. The orders were memorized by all troopers, and they covered everything from the Supreme Chancellor failing his duties (Order 65) to the Jedi betraying the Galactic Republic (Order 66). In addition to the memorization, organic chips were placed in each clone trooper's head. It made them carry out the orders, but some troopers were able to resist the chip.

Order 66 commanded all the clone troopers to kill their Jedi officers in the event that they had betrayed the Republic. Almost all the Jedi were exterminated because of this. Very few Jedi survived this such as Obi-Wan Kenobi and Yoda.

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